Single-cell states versus single-cell atlases—two classes of heterogeneity that differ in meaning and method

Janes KA. (2016) Single-cell states versus single-cell atlases—two classes of heterogeneity that differ in meaning and method. Curr Opin Biotechnol, 39, 120-5.

Parameterizing cell-to-cell regulatory heterogeneities via stochastic transcriptional profiles

Bajikar SS*, Fuchs C*, Roller A, Theis FJ†, Janes KA†. (2014) Parameterizing cell-to-cell regulatory heterogeneities via stochastic transcriptional profiles. Proc Natl Acad Sci, 111, E626-35.

Stochastic profiling of transcriptional regulatory heterogeneities in tissues, tumors, and cultured cells

Wang L, Janes KA. (2013) Stochastic profiling of transcriptional regulatory heterogeneities in tissues, tumors, and cultured cells. Nat Protoc, 8, 282-301.

Identifying single-cell molecular programs by stochastic profiling

Janes KA, Wang CC, Holmberg KJ, Cabral K, Brugge JS. (2010) Identifying single-cell molecular programs by stochastic profiling. Nat Methods, 7, 311-7.